I've been following some Japanese material on probiotics, and noticed their research concentrates on two things: (1) GI effects, which isn't even surprising given their obsession on bowel function, and (2) immunological effects--as an example, the best selling probiotic on Amazon Japan is Miyarisan (Clostridium butyricum) due to a believe that it treats autoimmune disorders. The first part of course needs live bacteria, while it seems that Japanese think probiotic bacteria don't need to be alive at the stomach to have that sort of effects.
Let's say, the LKM512 that have been well-discussed here. Judging from their marketing material, their inflammatory effect is more on the polyamines they synthesize (PMID:24686447). Using another strain as comparison, Meiji seems to think immunological effect of their 1073R-1 strain is partly contributed to the exopolysaccharides they secrete. (PMID:21986509)
An then I came across this supplement ingredient manufacturer, who thinks that heat-killed, ultrasonic micronized probiotic bacteria can up-regulate Th1 as well, their explanation being that: CD4 activity only works after an antigen is being presented by an antigen-presenting cell like dendritic cells, thus, micronized cell membranes is more likely to passed the intestinal wall and be presented to the dendritic cells there, and thus most effective to generate the required immunological response for the strain of bacteria.
This latter points work for vaccines. But does it really work for probiotics?