Can Scientists Distinguished Damaged DNA and more importantly, mtDNA from Healthy?
If they can distinguish this easily, then can't they simply find drug targets specifically for eliminating damaged mitochondrial DNA? That way you just get a turnover of fresh healthy mitochondria.
This is not to go into Turnbuckle's idea of manipulating dynamics in order to achieve this but rather use a direct drug based, CRISPR based or nano robot means.